Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKKSLLPLGLAIGLASLAASPLIQASTYTQTKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSEVRGEQLLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPHKGSDTADFLRQI-PPGSAGEAVLSGLVNSLGALISFLSSGSTGTQNSLGSLESLNSEGAARFNAKYPQGIPTSACGEGAYKVNGVSYYSWSG------SSPLTNFLDPSDAFLGASSLTFKNGTANDGLVGTCSSHLGMVIRDNYRMNHLDEVNQVFGLTSLFETSPVSVYRQHANRLKNASL
4GW3 Chain:A ((22-307))------------------------------STKYPIVLVHGLAGFNEIVGFPYFYGIADALRQDGHQVFTASLSAFNSNEVRGKQLWQFVQTLLQETQAKKVNFIGHSQGPLACRYVAANYPDSVASVTSINGVNHGSEIADLYRRIMRKDSIPEYIVEKVLNAFGTIISTFSGH--DPQDAIAALESLTTEQVTEFNNKYPQALPKTPGGEGDEIVNGVHYYCFGSYIQGLIAGEKGNLLDPTHAAMRVLN-TFFTEKQNDGLVGRSSMRLGKLIKDDYAQDHIDMVNQVAGLVG-YNEDIVAIYTQHAKYLASKQL


General information:
TITO was launched using:
RESULT:

Template: 4GW3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75390 for 2462 contacts (-30.6/contact) +
2D Compatibility (PS) -29971 + (NN) -9772 + (LL) 2716
1D Compatibility (HY) -24000 + (ID) 6000
Total energy: -142417.0 ( -57.85 by residue)
QMean score : 0.509

(partial model without unconserved sides chains):
PDB file : Tito_4GW3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GW3-query.scw
PDB file : Tito_Scwrl_4GW3.pdb: