Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPLPIPSLLIAGIGCRRGCSAEHLRALL---ERTLGEHGRSLAELDALASIDGKRDEPGLRQLATLLERPVHFLAPAVLHDYEPRLLSPSAVALRETGCSSVAEAAALALAERLGGGRADLLGAKRSDDRASIALARLLTERELP
3BY5 Chain:A ((10-102))
-------VTVAGIGCRKGAASDAIIAAVRAAERAFG------VTVDYLATAPLKADEAGLAEAAKGLSLSLEIVAQERLEAVAAETMTFSQASLDHSGSPSVSEAA---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3BY5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50898 for 572 contacts (-89.0/contact) +
2D Compatibility (PS) -9534 + (NN) -3304 + (LL) 3220
1D Compatibility (HY) -3600 + (ID) 1550
Total energy: -65666.0 ( -114.80 by residue)
QMean score : 0.386
(partial model without unconserved sides chains):
PDB file :
Tito_3BY5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BY5-query.scw
PDB file :
Tito_Scwrl_3BY5.pdb
: