Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAILVIAEHNNAALAAATLNTVAAAKAIGGDIHVLVAGQNVAAVAEAAAKVEGVSKVLVADNAAYAHQLPENVAPLIAELGK--NYSHVLAPATTNGKNFLPRVAALLDVDQISEIVEVVSPDTFKRPIYAGNAIATVQSSAAVKVITVRTTGFDAVAAEGGSAAVEQVSGPADAGKSAFVGEELAKSDRPELTAAKIVVSGGRGMQNGDNFKILYALADKLGAAVGASRAAVDAGFVPNDMQVGQTGKIVAPQLYIAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFQVADYGLVADLFDAVPELEKAV |
2A1T Chain:R ((21-326)) | -STLVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAGIAKVLVAQHDVYKGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPISDIIAIKSPDTFVRTIYAGNALCTVKCDEKVKVFSVRGTSFDAAATSGGSASSEKASSTSPVEISEWLDQKLT---RPELTGAKVVVSGGRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEM---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A1T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -236330 for 2531 contacts (-93.4/contact) +
2D Compatibility (PS) -32583 + (NN) -13581 + (LL) 672
1D Compatibility (HY) -32000 + (ID) 9550
Total energy: -323372.0 ( -127.76 by residue)
QMean score : 0.535
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