Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKIKRGLDLPISGAPEQRIEAARPVRSVALIGFDYHGMKPTMAVQVGDRVKLGQVLFTDKKNPSVSYTAPGAGVVSAIHRGEKRVLQSVVIDLDGDEQLEFARYPADKLATLSAEQVRDNLLQSGLWTALRTRPFSKVPDPESSPSSIFVTAIDTQPLAADPQVVIAEQGEAFQAGLTVLGRLA--RVFLCKAEGVSLPGEALSGVTAQAFSGPHPAGLPGTHIHFLDPVGAGKSVWNLNYQDVIAIGKLFTTGQLWTERVIALAGPVVEKPRLVRTRLGANLDELAAGQLQPGNNRLISGSVLGGRTAHGAYAYLGRYHLQLSCLKEGDQREFLHYLRAGVEKHSLLNVFVSRLLGGKRFAFTTSTNGSPRAMVPVGNYEAVMPLDILPTQLLRYLIVGDTEMAQKLGALELDEEDLALCSYVCAGKYEYGPILRDNLARIEQEG |
| 4U9Q Chain:A ((16-331)) | ------------AGTPSQVISDGKAIKKVALLGEEYVGMRPTMHVRVGDEVKKAQILFEDKKNPGVKFTSPVSGKVVEINRGAKRVLQSVVIEVAGDDQVTFDKFEANQLASLNRDAIKTQLVESGLWTAFRTRPFSKVPAIDSTSEAIFVTAMDTNPLAAEPTVVINEQSEAFVAGLDVLSALTTGKVYVCK-KGTSLPRSQQPNVEEHVFD------------HFLYPVSADHVAWSINYQDVIAVGQLFLTGELYTQRVVSLAGPVVNKPRLVRTVMGASLEQLVDSEIMPGEVRIISGSVLSGTKATGPHAYLGRYHLQVSVLRE---------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U9Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168612 for 2579 contacts (-65.4/contact) +
2D Compatibility (PS) -32010 + (NN) -10067 + (LL) 8932
1D Compatibility (HY) -34000 + (ID) 8450
Total energy: -244207.0 ( -94.69 by residue)
QMean score : 0.535
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