Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVYAIIGGTGLTQLEGLTLSESLPIETPYGAPSAPLQRGRYAGREVLFLARHGHPHRFPPHQVNYRANLWALKQAGAEAVIAVNAVGGIHAAMGTGHLCVPHQLIDYTSGREH-TYFAGDIEHVTHIDFSHPYDEPLRQRLIEALRALGLAHSSHGVYACTQGPRLETVAEIARLERD--GNDIVGMTGMPEAALARELDLPYACLALVVNPAAGKSAGIITMAEIEQALHDGIGKVREVLARVLAG
1WTA Chain:A ((16-252))
-----VIGGSGLYDPGIVENPVEVKVSTPYGNPSDFIVVGDVAGVKVAFLPRHGRGHRIPPHAINYRANIWALKALGVKWVISVSAVGSLREDYRPGDFVVPDQFIDMTKNRRHYTFYDGPV--TVHVSMADPFCEDLRQRLIDSGRRLGYTVHERGTYVCIEGPRFSTRAE-SRVWKDVFKADIIGMTLVPEINLACEAQLCYATLAMVTDYDVWADRP-VTAEEVERVMISNVERARRMLYDVI--
General information:
TITO was launched using:
RESULT:
Template:
1WTA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -154363 for 1933 contacts (-79.9/contact) +
2D Compatibility (PS) -25954 + (NN) -15109 + (LL) 1136
1D Compatibility (HY) -20400 + (ID) 4850
Total energy: -219540.0 ( -113.57 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_1WTA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WTA-query.scw
PDB file :
Tito_Scwrl_1WTA.pdb
: