Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEPFRNIGIIGRLGSTQVLDTIRRLKKFLIDRHLHVILEDTIAEVLPGHGLQTCSRKIMGEI-----CDLVVVVGGDGSMLGAARALARHKVPVLGINRGSLGFLTDIRPDELEAKVGEVLDGQYIVESRFLLDAQVRRGIDSMGQGDALNDVVLHPGKSTRMIEFELYIDGQFVCSQKADGLIVATPTGSTAYALSAGGPIMHPKLDAIVIVPMYPHMLSSRPIVVDGNSELKIVVSPNMQIYPQVSCDGQNHFTCAPGDTVTISKKPQKLRLIHPIDHNYYEICRTKLGWGSRLGGGD |
1Y3H Chain:A ((5-274)) | ----RSVLLVVHT-----TETARRVEKVLGDNK--IALRVLS--------------------HAADGCELVLVLGGDGTFLRAAELARNASIPVLGVNLGRIGFLAEAEAEAIDAVLEHVVAQDYRVEDRLTLDVVVRQGGRIVNRGWALNEVSLEKGPRLGVLGVVVEIDGRPVSAFGCDGVLVSTPTGSTAYAFSAGGPVLWPDLEAILVVPNNAHALFGRPMVTSPEATIAIEIEADGH-DALVFCDGRREMLIPAGSRLEVTR--------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1Y3H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -168462 for 1845 contacts (-91.3/contact) +
2D Compatibility (PS) -25748 + (NN) -12822 + (LL) 3324
1D Compatibility (HY) -17600 + (ID) 4200
Total energy: -225508.0 ( -122.23 by residue)
QMean score : 0.451
|
|
|