Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRLQRGFTLLELLIAIAIFALLALATYRMFDSVMQTDQATRVQEQRMRELVRAMGALERDLTQAVERPVRDELGDNRGAFLSEGE-----NDQIVEFTRGGWRNPLGQ-ARSRLQRVRWSLSGETLERRYWLVLDRAQDSKPRVQQVLDGVTALSWRFLDKEHNWQGHWPTDEGSEEERLESLPLAVEMTLEHRHYGKLVRVWRLLDPPLKQDQPQGQPGGENGENGEGGVPQPPEGMPGAPE |
| 2RET Chain:B ((9-165)) | -------------------------------------ELSQERTARLNELQRALVMMDSDFRQIALRQTRT-----SKKLLHWADYLLDSDNKGIMFARLGWHNPQQQFPRGEVTKVGYRIKDERLERVWWRYPDTP--QEGVVTPLLSDVEELNVRFYDGKQ-WINEWSNE--------LTLPAAISVELTLKDYGKIARTY---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RET.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26340 for 960 contacts (-27.4/contact) +
2D Compatibility (PS) -15261 + (NN) -5274 + (LL) 4136
1D Compatibility (HY) -9600 + (ID) 2100
Total energy: -54439.0 ( -56.71 by residue)
QMean score : 0.295
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