Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLFADAPLTLPDADLRYLPHWLDAPLASAWLLRLEQETPWEQPIL---RIHGEEHPTPRLVAWYGDPDAAYRYSGQVHRPLPWTALLGEIRERVEREVGQRVNGVLLNYYRDGQDSMGWHSDDEPELRRDPLVASLSLGGSRRFDLRRKGQTRIAHS-LELTHGSLLVMRGATQHHWQHQVAKTRRSCMPRLNLTFRLVYPQP
3RZL Chain:A ((32-203))
----------------------------------LEKEVEYFTGALARVQVFGKWHSVPRKQATYGDAGLTYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFVLINRYKDGSDHICEHRDDERELAPGSPIASVSFGASRDFVFRHK-----AVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTFRKI----
General information:
TITO was launched using:
RESULT:
Template:
3RZL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42199 for 1099 contacts (-38.4/contact) +
2D Compatibility (PS) -16434 + (NN) -4256 + (LL) 2756
1D Compatibility (HY) -10000 + (ID) 3350
Total energy: -73483.0 ( -66.86 by residue)
QMean score : 0.374
(partial model without unconserved sides chains):
PDB file :
Tito_3RZL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RZL-query.scw
PDB file :
Tito_Scwrl_3RZL.pdb
: