Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLFTSKPLSPQGRHVLITGASSGLGRETALHLAE---QGFQVIAGVRRQEDGERL-----ANACPSGRISTLLIDVTDEESIGRAAAQVAEKVGDTGLWGLVNNAGICISAPLECVSSDLLRRQLEVNLIGQLAVTRAILPLLRRGGAARLVNVTSGLGSVAIPYLGAYSAAQFAKEGVSDALRRELAPMGIQVSVVSPGAIWTPIWGKIASEGERALADAPDAVADLYRDTYLRFLQANEDGARNSATKPADVAAAVHAALTAAKPRTRYRVGADVRRGTLLARLLPDSVIDGMFRPIVTAAPAAKEEQRA |
1EQU Chain:A ((5-253)) | --------------VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGRVDV----LVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVL-DRTD-IHTFHR--FYQYLAHSKQVFREAAQNPEEVAEVFLTALRAPKPTLRY----------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1EQU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -130743 for 1951 contacts (-67.0/contact) +
2D Compatibility (PS) -26877 + (NN) -14941 + (LL) 3948
1D Compatibility (HY) -21200 + (ID) 4400
Total energy: -194213.0 ( -99.55 by residue)
QMean score : 0.456
|
|
|