Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAITALPSADGQELTIQIQGRFDFGAHQDFRDAYERVAIT--PRRYVVDLRNATYLDSSALGMLLLLRDHAGGENAQISLANCSPEVRKILAISNFEQLFKIS
1T6R Chain:A ((17-104))
---------------VRVQGDIDAYNSSELKEQLRNFISTTSKKKIVLDLSSVSYMDSAGLGTLVVILKDAKINGKEFILSSLKESISRILKLTHLDKIFKIT
General information:
TITO was launched using:
RESULT:
Template:
1T6R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40016 for 618 contacts (-64.8/contact) +
2D Compatibility (PS) -8577 + (NN) 47 + (LL) 1108
1D Compatibility (HY) -3600 + (ID) 650
Total energy: -51688.0 ( -83.64 by residue)
QMean score : 0.394
(partial model without unconserved sides chains):
PDB file :
Tito_1T6R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T6R-query.scw
PDB file :
Tito_Scwrl_1T6R.pdb
: