Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSAVIRVDSLNKTFARKQ----ALFNLRLEIQAGEMVALIGASGSGKSTLLRHVAGLARCDRDNGGSIDVLGRRLQASGRLSGEVRRLRAD-IGYIFQQFNLVNRLSVLDNVLLGFLGRMPRWRGSLGLFSAEQKRQALEALARVGLAD-FAGQRASTLSGGQQQRVAIARALTQKAEVILADEPIASLDPESARKVMDILADINRHDGKTVVVTLHQVDYALRYCPRAVALKGGRILFDGSSEYLSEGFLNELYGAEGDTPLLFSDRARRGAESQPELTLARA |
1L2T Chain:A ((1-223)) | ---MIKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCL---DKPTEGEVYI--DNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFK---YRGAMS--GEERRKRALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDINVA-RFGERIIYLKDGEV----------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L2T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152200 for 1771 contacts (-85.9/contact) +
2D Compatibility (PS) -23504 + (NN) -4396 + (LL) 3648
1D Compatibility (HY) -22000 + (ID) 4450
Total energy: -202902.0 ( -114.57 by residue)
QMean score : 0.468
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