Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPRLEPGMARIRVKDLRLRTFIGIKEEEILNKQDVLINLTILYPAADAVEVNDIEHALNYRTITKAIIRHVEENRFALLERMTQEILDLVMENPAVRYAEVEVDKPHALRFAESVSITLAGHR
3O1K Chain:A ((16-127))
-------MDKVFIEQLEVITTIGVYDWEQQIKQKLVLDLEMAHDNRAAGKSDDVADALDYAQVSQAVLEHIEQGRFLLVERVAEEVAELIMTRFAVPWLRIRLTKPGAVPQAKGVGVII----
General information:
TITO was launched using:
RESULT:
Template:
3O1K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85326 for 769 contacts (-111.0/contact) +
2D Compatibility (PS) -11923 + (NN) 826 + (LL) 252
1D Compatibility (HY) -10400 + (ID) 1600
Total energy: -108171.0 ( -140.66 by residue)
QMean score : 0.447
(partial model without unconserved sides chains):
PDB file :
Tito_3O1K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O1K-query.scw
PDB file :
Tito_Scwrl_3O1K.pdb
: