Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIIETIKEQIANNPILLYMKGSPNAPQCGFSSRAAQVLMACGEKFAYVDILQNPEIRANLPKYANWPTFPQLWVNGELVGGSDILAEMFEKGELQTLVKDAAAKANA
2LKU Chain:A ((10-106))
-----TLDKVVTSHKVVLFMKGTKDFPQCGFSQTVVQILKSLNAPFESVNILENELLRQGLKEYSSWPTFPQLYIDGEFFGGCDITVEAYKSGELQEQVEKA------
General information:
TITO was launched using:
RESULT:
Template:
2LKU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78727 for 695 contacts (-113.3/contact) +
2D Compatibility (PS) -10913 + (NN) -5954 + (LL) 1204
1D Compatibility (HY) -10000 + (ID) 2050
Total energy: -106440.0 ( -153.15 by residue)
QMean score : 0.733
(partial model without unconserved sides chains):
PDB file :
Tito_2LKU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LKU-query.scw
PDB file :
Tito_Scwrl_2LKU.pdb
: