Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTRKLGNSGLEIPALVFGGNV-FGWTADESTSFRLLDALLDAGLNCIDTADVYSRWVPGHQGGESETLIGKWLKRTG-KRDRMVIASKVGMD-MGNGHKGLSAAYIEQALERSLRRLQTDYLDLYQSHTDDPHTDLEETLSTYGELIKKGKVRVIGASNYDARRLLEARQVSARLNLPSYQSLQPEYNLYDRADYETNLEPTVEELGIGVISYYSLASGFLSGKYRNQADTAGRARGEKVKGY-------LNERG---VAILAALDEVAEQYNANPTQVALAWLIARPTVTAPIASATSLEQLDDLIAATHL--KLDEQAIHRLDSASAY |
| 3EAU Chain:A ((6-319)) | ---RNLGKSGLRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYA-------AGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSGIPPYSRA---SLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQVLPKLSSSIVHEIDS---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3EAU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -139612 for 2555 contacts (-54.6/contact) +
2D Compatibility (PS) -33129 + (NN) -21353 + (LL) 996
1D Compatibility (HY) -26000 + (ID) 5000
Total energy: -224098.0 ( -87.71 by residue)
QMean score : 0.540
|
|
|