Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEPLILD-APNADACIIWLHGLGADRTDFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARAIDEDQLNASADQVIALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTF-DDLALDERHKRIPVLHLHGSQDDVVDPALGRAAHDALQAQGVEVGWHDYPMGHEVSLEEIHDIGAWLRKRL
1AUO Chain:A ((1-217))
MTEPLILQPAKPADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFGDELELSASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYPMGHEVLPQEIHDIGAWLAARL
General information:
TITO was launched using:
RESULT:
Template:
1AUO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -170691 for 1816 contacts (-94.0/contact) +
2D Compatibility (PS) -23020 + (NN) -11045 + (LL) 0
1D Compatibility (HY) -23600 + (ID) 6950
Total energy: -235306.0 ( -129.57 by residue)
QMean score : 0.611
(partial model without unconserved sides chains):
PDB file :
Tito_1AUO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AUO-query.scw
PDB file :
Tito_Scwrl_1AUO.pdb
: