Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSQPVAFVTGCSSGIGRALA-----DAFQRAGYRVWASARKE-------DDVRALA--EAGFQAVQLDVNDAAALARLAEELGVEAAGLDVLVNNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFP-LLRRKSGLVVNVGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFGVEVLEVQPGAIASNFGASASREMDSVVDERSPWWPLRRQIQARAAASQ------DNPTSAEDFARQLLAAVQRRPRPPLVRIGNGSRALPALARWLPRGLLERLLKKRFGLDTRL |
1FDS Chain:A ((4-263)) | ----VVLITGCSSGIGLHLAVRLASDPSQ--SFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARER--VTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHT-----VLGSPEEVLD-RTDIHTFHRFYQYLAHSKQVFREAAQNP---EEVAEVFLTAL-RAPKPTL-RYFTTERFLPLL----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FDS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109236 for 1798 contacts (-60.8/contact) +
2D Compatibility (PS) -25574 + (NN) -14126 + (LL) 2876
1D Compatibility (HY) -20000 + (ID) 4650
Total energy: -170710.0 ( -94.94 by residue)
QMean score : 0.504
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