Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLLLVLAVQMSGCATVRTLDAAKPGAPVVYAGTRLDWYSLHGGCCPMERFGAEAPAHPGLDLPGSALLDTLLLPFSLATAIGLNLGVSGGM
2AP3 Chain:A ((3-22))
----MGIQRPTSTTTDKKEI-----------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2AP3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 111 for 54 contacts (2.1/contact) +
2D Compatibility (PS) -1406 + (NN) 2288 + (LL) 3624
1D Compatibility (HY) 2000 + (ID) 50
Total energy: 6567.0 ( 121.61 by residue)
QMean score : -0.450
(partial model without unconserved sides chains):
PDB file :
Tito_2AP3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AP3-query.scw
PDB file :
Tito_Scwrl_2AP3.pdb
: