Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIAAYQARCQARVDAALDALFVAPREELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKTGALIEASVRLGALASGRAEPASLAALERYAEAIGLAFQVQDDILDVESDTATLGKTQGKDQAHNKPTYPALLGLEAAKGYALELRDLALAALDGFPPSADPLRQLARYIVERRN
3LSN Chain:A ((3-293))
-LTAYQASSQARVDAAMHTLFTAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGKPEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPALSDASAEIRLRMVTTLAQAAGPAGMVGGQAIDLGSVGLKLDQQALEYMHRHKTGALIEASVILGALASGRAEKGELKALQTYAQAIGLAFQVQDDILDVESDTATL------------PTYPALLGLAAAKEYALELRDQALHALRPFDAAAEPLRELARYIVE---
General information:
TITO was launched using:
RESULT:
Template:
3LSN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -147721 for 2419 contacts (-61.1/contact) +
2D Compatibility (PS) -31483 + (NN) -31018 + (LL) 500
1D Compatibility (HY) -30800 + (ID) 10850
Total energy: -251372.0 ( -103.92 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_3LSN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LSN-query.scw
PDB file :
Tito_Scwrl_3LSN.pdb
: