Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKSWLTASLLALTVASPFAAADIQGHKAGDFIIRGGFATVDPDDSSSDIKLDGAKQRGTKATVDSDTQLGLTFTYMFADKWGVELVAATPFNHQVDVKGLGPGLDGKLADIKQLPPTLLLQYYPMGGTNSAFQPYGGLGVNYTTFFDEDLASNRKAQGFSSMKLQDSWGLAGELGFDYMLNEHALFNMAVWYMDIDTKASINGPSALGVNKTKVDVDVDPWVYMIGFGYKF |
2F1V Chain:A ((2-191)) | ---------------------------EAGEFFMRAGSATVRPTEG--------------GFSVTNNTQLGLTFTYMATDNIGVELLAATPFRHKIGTRATG-----DIATVHHLPPTLMAQWY-FGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVGVDYLINRDWLVNMSVWYMDIDTTANYK----LGGAQQHDSVRLDPWVFMFSAGYRF |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2F1V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -40392 for 1424 contacts (-28.4/contact) +
2D Compatibility (PS) -19184 + (NN) -38 + (LL) 2072
1D Compatibility (HY) -19600 + (ID) 4550
Total energy: -81692.0 ( -57.37 by residue)
QMean score : 0.266
|
|
|