Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFSWSEILLELLAVAVLFFGVHWSLRHAKTLDQASMLPFADDEEVARRVERETGRSRTGCGCPGRCQGDCRHWDKNWPA
2JO1 Chain:A ((12-37))
-DYQSLQIGGLVIAGILFILGILIVLS-----------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2JO1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9509 for 103 contacts (-92.3/contact) +
2D Compatibility (PS) -2734 + (NN) -2964 + (LL) 2472
1D Compatibility (HY) -2800 + (ID) 200
Total energy: -15735.0 ( -152.77 by residue)
QMean score : -0.019
(partial model without unconserved sides chains):
PDB file :
Tito_2JO1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JO1-query.scw
PDB file :
Tito_Scwrl_2JO1.pdb
: