Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTPRPSLTLTLLQAREAAMSFFRPSLNQHGLTEQQWRVIRILRQQGEMESYQLANQACILRPSMTGVLARLERDGIVRRWKAPKDQRRVYVNLTEKGQQCFVSMSGDMEKNYQRIQERFGEEKLAQLLELLNELKKIKP
2FA5 Chain:A ((43-152))
---------------------------DRYGMAIPEWRVITILALYPGSSASEVSDRTAMDKVAVSRAVARLLERGFIR---------RSMLALSPAGRQVYETVAPLVNEMEQRLMSVFSAEEQQTLERLIDRLAK---
General information:
TITO was launched using:
RESULT:
Template:
2FA5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46535 for 648 contacts (-71.8/contact) +
2D Compatibility (PS) -10813 + (NN) -4198 + (LL) 2800
1D Compatibility (HY) -6400 + (ID) 1200
Total energy: -66346.0 ( -102.39 by residue)
QMean score : 0.526
(partial model without unconserved sides chains):
PDB file :
Tito_2FA5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FA5-query.scw
PDB file :
Tito_Scwrl_2FA5.pdb
: