Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLTLFRDYPNGRYAMTFDVIIVGGSYAGISAGMQLARARRRVLVMDTGLRRNRFARASHGFLGQDGRDPAAIADDARAQLLAYPSVEWLSEAAVAAKKEADGFVVKAANGERFTARRLILASGVADELPEIPGLAERWGRHVFHCPYCHGYELDGGPIGVLAASPLAIHHALMLPDWGATTFFLNGVFEPDAEQMSRLDRRGVTIEREAVVALGGARADVTLASGRTITLAGLFTQPRTRMASPLAALLGCEFEDGPSGPFIRTDGMRETSVPGVFACGDAALAAGNVAIAVGDGARTGGAAHHSLLFR
4JNA Chain:A ((47-339))---------------MLFDVIVIGGSHAGQSAALQIARARRRVLVIDAGARRNRFASQSHGVIGQDGRSPDAIAADGKAQLLAYPNAQWREDSVVRAERSDAGYTLICASGQHYRACQLVLAFGVVDELPELEGLEERWGESVFHCPYCHGYELDGGRIGVLGSGPLSYLSAMLMPEWGQTVFLTDASFEPDEEQREALARRGVEIVRDRIARIVD-RATVELADGRRIAFDGLFTMNRMRLSSPVAEQLGCAIEEGPLGPYVRTDDAMETSTPGVFACGDITHRGGTVALAIGNGALAGIAAHRKLVF-


General information:
TITO was launched using:
RESULT:

Template: 4JNA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -208986 for 2579 contacts (-81.0/contact) +
2D Compatibility (PS) -30762 + (NN) -4913 + (LL) 1112
1D Compatibility (HY) -25600 + (ID) 8250
Total energy: -277399.0 ( -107.56 by residue)
QMean score : 0.555

(partial model without unconserved sides chains):
PDB file : Tito_4JNA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JNA-query.scw
PDB file : Tito_Scwrl_4JNA.pdb: