Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFRPRLLLTSLAIALGACSPQDPQAVTSAALAQQVILPTYSRWVEADQALASSALAYCQGKEDLA--KARDAFHAAQKAWAELQPLLIGPLAEGNRAWQVQFWP-DKKDLV---GRQVEQLLKNNPQVDAAALAKASVVVQGLSAYEYILFDSKIDLADAATKARYCPLLEAIGTHQQQLAQDILARWKNDGGMLTQMSKFPNDRYADAHEAIAELLRVQVTALDMLKKKLGTPLGRQSKGIPQPYQAEAWRSNASLASLDASLSGAQALWEGIDGKGLKTLLPAEQKDLAGKIDAAYADSHAKLAALEQKPLSELLASEDGRNQLNALYDSLNVVHRLHEGDLARALGVQLGFNANDGD |
3N8U Chain:A ((237-352)) | ----------------------------------VVVPTYKSLKEKNDALYNAVIVLADNPSNSAFETACDAWITAREPWEKSEAFLFGPVDEMGLDPNMDSWPLDQNAIVQILNSQSWSDLEWSEGDDEAAVESAQ-NVRGFHTLEFLLY----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N8U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23418 for 659 contacts (-35.5/contact) +
2D Compatibility (PS) -11860 + (NN) -7633 + (LL) 16552
1D Compatibility (HY) -6800 + (ID) 1550
Total energy: -34709.0 ( -52.67 by residue)
QMean score : 0.492
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