Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTLLRRGLLVFLAAFPLLSMAAPTPQQVVQGTVDELLSDIKANKAAYKADPQKLYATLDRILGPVVDAEGIAKSVMTVKYSRQASPEQIKRFEEVFKNSLMQFYGNALLEYDNQDIRVLPSSAKPSDDRASVNMEIRDSKGTVYPVSYTMTNLAGGWKVRNVIINGINIGKLFRDQFADTMQKNRNDLEKTIAGWGEVVAKAKETAKAEEAGAK
2QGU Chain:A ((29-207))
-----------------------ADAQATVKTAVDDVLATIKGDPDLRGGNLQKVFQLVDQKIVPRADFKRTTQIAMGRF-WSQATPEQQQQIQDGFKSLLIRTYAGALANVRNQTVAYKPFRAAADDTDVVVRSTVN-NNGEPVALDYRVEKSPNGWKVYDINISGLWLSETYKNQFADVISKRG-GVGGLVQFLDERNAQLAK----------
General information:
TITO was launched using:
RESULT:
Template:
2QGU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55405 for 1279 contacts (-43.3/contact) +
2D Compatibility (PS) -19254 + (NN) -7045 + (LL) 3496
1D Compatibility (HY) -6800 + (ID) 2250
Total energy: -87258.0 ( -68.22 by residue)
QMean score : 0.600
(partial model without unconserved sides chains):
PDB file :
Tito_2QGU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QGU-query.scw
PDB file :
Tito_Scwrl_2QGU.pdb
: