Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRLEQILTPGRSLVNVPGGSKKRVLEQIANLVARELPEFDAQTIFENLVAREKLGSTGFGNGIAIPHCRLSGCQSPISAVLHLDAPVDFDALDGAPVDLLFVLLVPEAATEEHLELLRQIAAMLDRADVRDRLRSAPTAEALYQIVVDVQNGQ
2A0J Chain:A ((20-147))
-------------------GSKKRLFEEAGLLLERE-SSLSHADVFECLFAREKLGSTGLGQGVAIPHGRHAGVKQATGAFIRTREPVGFDAPDGKPVSLIFILLVPENATGEHLEVLSKLAGKFSQKSIRESLMTVSSAEEVRAILT------
General information:
TITO was launched using:
RESULT:
Template:
2A0J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102349 for 930 contacts (-110.1/contact) +
2D Compatibility (PS) -14796 + (NN) -13371 + (LL) 1552
1D Compatibility (HY) -10800 + (ID) 2950
Total energy: -142714.0 ( -153.46 by residue)
QMean score : 0.714
(partial model without unconserved sides chains):
PDB file :
Tito_2A0J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A0J-query.scw
PDB file :
Tito_Scwrl_2A0J.pdb
: