Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPLLDYLASHPLAFVLCTILLGLLVGSFLNVVVHRLPKMMERNWKAEAREALGLEPEPKQATYNLVLPNSACPRCGHEIRPWENIPLVSYLALGGKCSSCKAAIGKRYPLVELATALLSGYVAWHFGFTWQAGAMLLLTWGLLAMSLIDADHQLLPDVLVLPLLWLGLIANHFGLFASLDDALFGAVFGYLSLWSVFWLFKLVTGKEGMGYGDFKLLAMLGAWGGWQILPLTILLSSLVGAILGVIMLRLRNAESGTPIPFGPYLAIAGWIALLWGDQITRTYLQFAGFK |
| 2YJG Chain:A ((133-218)) | ----------------------------------------------------------------------------HDSRNSENMELIGTLPSGGKLEINKLA-------VEADLLVAEGFIEPHF-FAGFSGGRKSILPGIASVQCILANH--CSEFIKNPYARTGVLENN---------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YJG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56151 for 518 contacts (-108.4/contact) +
2D Compatibility (PS) -8417 + (NN) 1330 + (LL) 14768
1D Compatibility (HY) -1200 + (ID) 1250
Total energy: -50920.0 ( -98.30 by residue)
QMean score : 0.062
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