Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRRLPFLLRCALFCGAGLLAATAQARMESLDDDQLSDVVGQAFINLTTDAANGLNFTRINFGADIETQLNMKKLQLGQYNRSGEL----------AGSADIAIDNFALGTVNDTTGAINPFLISNPYIEFAYDGSKMVGIRIGFGEAKGYLSGDIKTLTGNVPVDLYGTGSQLGGSISCGLLALDCLAAKTA------------ITLTGSSQYTAQAELVNSSGNPDPIRAAMIGLK-NGTALDMHDSTIIGSLVNVLLPFLTSNDCKLMGAQTCFNLAQYQSFPIGTVDPNNAQNFIDSSKGFFISMQSQNVQWRDQQDPSKLVAALAGAFLNMSRNADGTAPIKVDFGQAFNGIPRQDTCLGGLNKGC |
| 2QUB Chain:A ((126-289)) | ----------------------------------------------------------------------------LGKYDSEGNLTAIGISFRGTSGPRESLIGDTIGDVINDLLAGFGPKGYADGYTLKAF--GNLLGDVAKFAQAHG-LSGE----------DVVVSGHSLGG------LAVNSMAAQSDANWGGFYAQSNYVAFASPTQYEAGGKVINIGYENDPVFRALDGTSLTLPSLGVHDAPHTSATNNIV---------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QUB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12587 for 935 contacts (-13.5/contact) +
2D Compatibility (PS) -14433 + (NN) -2467 + (LL) 11396
1D Compatibility (HY) -5600 + (ID) 2000
Total energy: -25691.0 ( -27.48 by residue)
QMean score : -0.006
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