Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKNKTFLAAALVALAASFPVHAATDYTRTRYPIVLSHGLFGF-KSVGPVDYWHAIVPALEKDGAKVFATSQSPVNSNEV---RGEQLLAQVEEVLALTGAEKVNLIGHSQGGMTVRYVAGVAPQLVASVTTMGTPHKGTPVADAVTGFSEFLGPIGTEVIASAVEALFSVV-DIVDGGEWVKGDALAALNSLNTPGTARFNQRFPQA---IPASACGQGA--ETVAGVRY--YSMSGTG------------------SLTNALDPSSAGLAVTG-LLFGEA---NDGLVGQCSSHLGSVVKDNYRMDHLDEVNQLLGLVSLFESDPTQVYRQHANRLRNVGL |
| 1CVL Chain:A ((1-315)) | -----------------------ADTYAATRYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPNGRGEQLLAYVKQVLAATGATKVNLIGHSQGGLTSRYVAAVAPQLVASVTTIGTPHRGSEFADFV---QDVLKTDPTGLSSTVIAAFVNVFGTLVSSSHNTDQDALAALRTLTTAQTATYNRNFPSAGLGAPGS-CQTGAATETVGGSQHLLYSWGGTAIQPTSTVTGATDTSTGTLDVANVTDPSTLALLATGAVMINRASGQNDGLVSRCSSLFGQVISTSYHWNHLDEINQLLGVRGANAEDPVAVIRTHVNRLK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CVL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78861 for 2427 contacts (-32.5/contact) +
2D Compatibility (PS) -29563 + (NN) -8501 + (LL) 2560
1D Compatibility (HY) -21200 + (ID) 7050
Total energy: -142615.0 ( -58.76 by residue)
QMean score : 0.376
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