Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTTPHLMLEPAFHPGLDTAGSGRDAIGLGAATSGRLDARHGTILSLEDINVSFDGFKALRDLTLYIGVGELRCIIGPNGAGKTTLMDVITGKTRPQSGTAYFGDTLDLTRMSEVQIAQAGIGRKFQKPTVFEALSVFENLELAQ-RADKSVWASLRARLDGTQRERIEE----VLATIRLLESRQRPAGLLSHGQKQFLEIGMLLVQEPQLLLLDEPVAGMTDAETEFTAELFKSL----ARKHSLMVVEHDMGFVGSIADHVTVLHQGHVLAEG----SLAEVQADEQVIEVYLGR |
| 1GAJ Chain:A ((7-256)) | -------------------------------------------ILRTENIVKYFGEFKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYF-ENKDITNKEPAELYHYGIVRTFQTPQPLKEMTVLENLLIGEINPGESPLNSLFYKKWIPKEEEMVEKAFKILEFLKLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDQPIAGVAPG---LAHDIFNHVLELKAKGITFLIIEHRLDIVLNYIDHLYVMFNGQIIAEGRGEEEIKNVLSDPKVVEIYIG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GAJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134886 for 1903 contacts (-70.9/contact) +
2D Compatibility (PS) -25437 + (NN) -9652 + (LL) 1672
1D Compatibility (HY) -23200 + (ID) 4000
Total energy: -195503.0 ( -102.73 by residue)
QMean score : 0.449
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