Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATYNADAIEVLSGLDPVRKRPGMY---TDTTRPNHLAQEVIDNSVDEALAGHAKSVQVILHQDNSLEVIDDGRGMPVDIHPEEGVPGVELILTKLHAGGKFSNKNYQFSGGLHGVGISVVNALSTRVEVRVKRDANEYRMTFADGFKD-SDLEVIGTVGKRNTGTSVHFWPDPKYFDSAKFSVSRLKHVLKAKAVLCPGLSVVFEDKNTGERVEWHFEDGLR---SYLTDAVAELPRLPDEPFCGNLEGSKEAVSWALLWLPEGGESVQESYVNLIPTAQGGTHVNGLRQGLLDAMREFCEFRNLLPRGVKLAPEDVWERIAFVLSMKMQEP--QFSGQTKERLSSREAAAFVSGVVKDAFSLWLNEHAEIGLQLAELAIS-----NAGRRLKAGKKVERKKITQGPALPGKLADCAGQEPMRAELFLVEGDSAGGSAKQARDKEFQAIMPLRGKILNTWEVDGGEVLASQEVHDIAVAIGVDPGAS-DLAQLRYGKICILADADSDGLHIATLLCALFVRHFRPLVEAGHVYVAMPPLYRIDLGKDIYYALDEAERDGILERLAAEKKRGKPQVTRFKGLGEMNPLQLRETTMDPNTRRLVQLTLEDATGTLEIMDMLLAKKRAGDRKSWLESKGNLAEVLV |
| 4JUO Chain:C ((47-657)) | ----------------AVRKRPGMYIGSTDGAGLHHLVWEIVDNAVDEALS---DRIDVTINKDGSLTVQDH---------------TVEVIFTILHAGGKF----------LHGVGSSVVNALSSWLEVEITRDGAVYKQRFENGGKPVTTLKKIGTAPKSKTGTKVTFMPDATIFSTTDFKYNTISERLNESAFLLKNVTLSLTDKRTDEAIEFHYE--VQDFVSYLNEDKEILT--PVLYFEGEDNGFQVEVA---LQYNDGFSDNILSFVNNVRTKDGGTHETGLKSAITKVMNDYARKTGLLKEK---EGSDYREGLAAVLSILVPEEHLQFEGQTKDKLGSPLARPVVDGIVADKLTFFLMENGELASNLIRKAIKARDAREAARKAR-------------------LTPAQSKNPAKNELYLVEGDSAGGSAKQGRDRKFQAILPLRGKVINTAKAKMADILKNEEINTMIYTIGAGVGADFSIEDANYDKIIIMTDADTDGAHIQTLLLTFFYRYMRPLVEAGHVYIA-PPLYK-----------AYAWTDGELEELRK--------LQRYKGLGEMNADQLWETTMNPETRTLIRVTIEDLARAERRVNVLMGDK-VEPRRKWIE---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JUO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -255481 for 4038 contacts (-63.3/contact) +
2D Compatibility (PS) -55399 + (NN) -16980 + (LL) 5008
1D Compatibility (HY) -42400 + (ID) 11600
Total energy: -376852.0 ( -93.33 by residue)
QMean score : 0.423
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