Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNVLIVHAHNEPQSFTRALCDQACETLAGQGHAVQVSDLYAMNWNPVASAADFAER-ADPDYLVYALEQRESVKRQSLAADIQAELDKLLWADLLILNFPIYWFSVPAILKGWFDRVLVSGVCYGGKRFYDQGGLAGKKALVSLTLGGRQHMFGEGAIHGPLEDMLRPILRGTLAYVGMQVLEPFVAWHVPYISEEARGNFLRAYRARLENLEQDVPLRFPRLEQFDALLQPLAR
2QWX Chain:A ((5-221))
-KVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYAMNFEPRATDKDITGTLSNPEVFNYGVETHEAYKQRSLASDITDEQKKVREADLVIFQFPLYWFSVPAILKGWMDRVLCQGFAFDIPGFYDSGLLQGKLALLSVTTGGTAEMYTKTGVNGDSRYFLWPLQHGTLHFCGFKVLAPQISFAPEIASEEERKGMVAAWSQRLQTIWKEEPI-----------------
General information:
TITO was launched using:
RESULT:
Template:
2QWX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -174647 for 1685 contacts (-103.6/contact) +
2D Compatibility (PS) -23005 + (NN) -6561 + (LL) 1752
1D Compatibility (HY) -22000 + (ID) 4700
Total energy: -229161.0 ( -136.00 by residue)
QMean score : 0.471
(partial model without unconserved sides chains):
PDB file :
Tito_2QWX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QWX-query.scw
PDB file :
Tito_Scwrl_2QWX.pdb
: