Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRILLLGANGQVGWELQRALAPLGELLVCDRRR----ADLADPEGLARLVRAERPQFIVNAGAYTAVDKAESDADNARLINARAVAVLAEEAAACGAWLVHYSTDYVFDGAGSVPFAEDAPTGPLSVYGQTKLEGEQAIRASGCRHLIFRTSWVYAARGGNFAKTMLRLAGQRDELKVVADQFGAPTSAELIADVTAQALQRLCWDVELAARASGTYHLVASGETSWHLYARFVIEQALERGWELQATPQRVLPIATEDYPVPAKRPANSRLDNRKLQQVFGLVLPDWRYHAGRMIQELSEQGPL |
| 1KC3 Chain:A ((1-293)) | MN-ILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVA----GLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVP--TSAYPTPASRPGNSRLNTEKFQRNFDLILPQWELGVKRMLTEM------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1KC3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -154676 for 2547 contacts (-60.7/contact) +
2D Compatibility (PS) -31607 + (NN) -12020 + (LL) 868
1D Compatibility (HY) -26800 + (ID) 7850
Total energy: -232085.0 ( -91.12 by residue)
QMean score : 0.626
|
|
|