Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQSNTLTVQILDKEYCINCPDDERANLESAARYLDGKMREIRSSGKVIGADRVAVMAALNITHDLLHRKERLDQESSSTRERVRELLDRVDRALANPADAGEA
4LW2 Chain:A ((19-83))
---------------------------LQDAGVYLDSAATALKPEAVVEATQQFYSLSAGNVHRSQFAEAQRLTARYEAAREKVAQLLNAPD------------
General information:
TITO was launched using:
RESULT:
Template:
4LW2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8195 for 286 contacts (28.7/contact) +
2D Compatibility (PS) -6647 + (NN) 1618 + (LL) 2192
1D Compatibility (HY) -2800 + (ID) 800
Total energy: 1758.0 ( 6.15 by residue)
QMean score : 0.138
(partial model without unconserved sides chains):
PDB file :
Tito_4LW2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LW2-query.scw
PDB file :
Tito_Scwrl_4LW2.pdb
: