Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNVLIVDDEPLARERLARLVGQLDGYRVLEPSASNGEEALTLIDSLKPDIVLLDIRMPGLDGLQVAARLCEREAPPAVIFCTAHDEFAL--EAFQVSAVGYLVKPVRSEDLAEALKKASRPNRVQLAALTKPPASGGSGPRSHISARTRKGIELIPLEEVIFFIADHKYVTLRHAQGEVLLDEPLKALEDEFGERFVRIHRNALVARERIERLQRTPLGHFQLYLKGLDGDALTVSRRHVAGVRRLMHQL
4IGA Chain:A ((8-121))
--VLIVDDAAFMRMMLKDIITKA-GYEV-AGEATNGREAVEKYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMGQQAMVIEAIKAGAKDFIVKPFQPSRVVEALNKV------------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4IGA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93478 for 933 contacts (-100.2/contact) +
2D Compatibility (PS) -12575 + (NN) -13042 + (LL) 10008
1D Compatibility (HY) -10800 + (ID) 2050
Total energy: -121937.0 ( -130.69 by residue)
QMean score : 0.686
(partial model without unconserved sides chains):
PDB file :
Tito_4IGA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IGA-query.scw
PDB file :
Tito_Scwrl_4IGA.pdb
: