Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTFAKGILAALALAAAVGQASATELEHWPAPAARQLNALIEANANKGAYAVFDMDNTSYRYDLEESLLPYLEMKGVLTRDRLDPSLKLIPFKDQAGHKESLFSYYYRLCEIDDMVCYPWVAQVFSGFTLRELKGYVDELMAYGKPIPATYYDGDKLATLDVEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPENVIGVTTLLKNRKTGELTTARKQIAEGKYDPKANLDLEVTPYLWTPATWMAGKQAAILTYI--DRWKRPILVAGDTPDSDGYMLFNGTAENGVHLWVNRKAKYMEQINGMIKQHSAAQAKAGLPVTADRNWVIVTPEQIQ |
4GXT Chain:A ((221-323)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGL-RLMKD-------------DEGKILPKFDKDF--------PISIREGKVQTINKLIKNDRNYGPIMVGG---DSDG----------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4GXT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -33324 for 602 contacts (-55.4/contact) +
2D Compatibility (PS) -11208 + (NN) -10427 + (LL) 17992
1D Compatibility (HY) -7600 + (ID) 2150
Total energy: -46717.0 ( -77.60 by residue)
QMean score : 0.336
|
|
|