Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQTNLCDSARQRAEAAEAERILRSCVHCGFCNATCPTYQELGDELDGP-------RGRIYLIKQFLERDEASERTRLHLDRCLSCRNCETTCPSGVEYHKLLDIGRDLLAERLPRGFRQRLLRDGLRLLAPRPGLFGALAGAAGRLRPLLPEAMQGKLPRRVAAPGRRPQPRHARRVLLLEGCVQPALSPNTNAAAARVLDRLGISVTPAAAAGCCGALDFHLDAQERGRQRARRNIDAWWPLLREGAEAIVQTASGCGAFVKDYAYLLRDDPRYADKAREVAAAARDLVEVLRDEPLESLGLRCDQRLAFHCPCTLQHAQRLGGAVEAVLRRLGFHLTEVADGHLCCGSAGTYSLTQPALSQRLRDNRLDALESGAPDVIVTANVGCQAHLDGAGRTPVRHWIELLDQALPGGE |
| 3ABV Chain:B ((144-243)) | ----------QSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTGTCPKGLNPGKAIAEIKKMMA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ABV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28133 for 592 contacts (-47.5/contact) +
2D Compatibility (PS) -9572 + (NN) -2428 + (LL) 20268
1D Compatibility (HY) -4400 + (ID) 1500
Total energy: -25765.0 ( -43.52 by residue)
QMean score : 0.351
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