Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKLLVSLLLTLGLTGLAHAAGDAAAGQAKAAVCGACHGADGNSPAPNFPKLAGQGERYLLKQMHDIKDGK---------RTVLEMTGLLTNLSDQDLADIAAYFASQKMSVGMADPNLVAQGEALFRGGKIAEGMPACTGCHSPSGVGIATAGFPHLGGQHATYVAKQLTDFREGTRTNDGDTKIMQSIAAKLSNKDIAAISSYIQGLH
1M70 Chain:A ((1-190))
--------------------AGDAEAGQGKVAVCGACHGVDGNSPAPNFPKLAGQGERYLLKQLQDIKAGSTPGAPEGVGRKVLEMTGMLDPLSDQDLEDIAAYFSSQKGSVGYADPALAKQGEKLFRGGKLDQGMPACTGCHAPNGVGNDLAGFPKLGGQHAAYTAKQLTDFREGNRTNDGDTMIMRGVAAKLSNKDIEALSSYIQGLH
General information:
TITO was launched using:
RESULT:
Template:
1M70.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29749 for 1445 contacts (-20.6/contact) +
2D Compatibility (PS) -19893 + (NN) -11733 + (LL) 1856
1D Compatibility (HY) -16000 + (ID) 7150
Total energy: -82669.0 ( -57.21 by residue)
QMean score : 0.415
(partial model without unconserved sides chains):
PDB file :
Tito_1M70.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1M70-query.scw
PDB file :
Tito_Scwrl_1M70.pdb
: