Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRLQPVRLVSFVTTDLAGITRGRSLPLATLEEQLASGCGWVPANSSLTPQDLIDESSPWGSHGDLRLLPDPNSRV----RVEQGPDAAAPALDYLHGNLVETDGTPWPACPRSLLRAEVERYRDSGLQVIA-AFEHEFSLLGL--PGE------RPAAAFSLQAQRAAGQFPGWLVSALAQAGTEPEMFLPEYGQRQYEVTCRPAQGVAAADRAVNVREVTREVARQMGLRTCFAPLPAPGAVTNGVHLHLSLQHADGSPLLYEPGRPNDLSELGEHWAAGVLAHLPALCALTAPTAASYLRLKPHHWSAAYACLGLRNREAALRICPVVSVGGKPLGKQYNLEFRPMDATTCPHLAMAAVLIAGRLGIERRLPLRALADVDPHGLSDEERQARGIQALPATLGDALDCLQRDEALCAELPKPLLDTYLAMKRHELALTAGLSDDDLCRHYAELY |
| 4LNK Chain:A ((15-423)) | ----ENVKYIRLQFTDILGTIKNVEIPVSQLGKALDNKVMF--DGSSIEGFVRIEES-------DMYLYPDLNTFVIFPWTAEKGKVARFIC------DIYNPDGTPFEGDPRNNLKRILKEMEDLGFSDFNLGPEPEFFLFKLDEKGEPTLELNDKGGYFDLAPTDLGENCRRDIVLELEEMGFEIEASHHEVAPGQHEIDFKYAGAVRSCDDIQTFKLVVKTIARKHGLHATFMPKPLFGVNGSGMHCNLSL-FKNGVNAFFDENADLQLSETAKHFIAGIVKHATSFTAVTNPTVNSYKRLVPGYEAPCYVAWSAQNRSPLIRIPASRGISTR-------VEVRSVDPAANPYLALSVLLAAGLDGIKNKLEAPAPIDRNIYVMSKEERMENGIVDLPATLAEALEEFKSNEVMVKALGEHLFEHFIEAKEIE-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LNK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166702 for 3319 contacts (-50.2/contact) +
2D Compatibility (PS) -42198 + (NN) -25847 + (LL) 1960
1D Compatibility (HY) -19200 + (ID) 5900
Total energy: -257887.0 ( -77.70 by residue)
QMean score : 0.453
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