Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLESHLIIYFLLAVIQFLLGIFTNGIIVVVNGIDLIKHRKMAPLDLLLSCLAVSRIFLQLFIFYVNVIVIFFIEFIMCSANCAILLFINELELWLATWLGVFYCAKVASVRHPLFIWLKMRISKLVPWMILGSLLYVSMICVFHSKYAGFMVPYFLRKFFSQNATIQKEDT---LAIQIFSFVAEFSVPLLIFLFAVLLLIFSLGRHTRQMRNTVAGSRVPGRGAPISALLSILSFLILYFSHCMIKVFLSSLKFHIRRFIFLFFILVIGIYPSGHSLILILGNPKLKQNAKKFLLHSKCCQ |
4OHC Chain:A ((10-230)) | -----------------------------------------TGYDRQSISDTTAKILLEVQAVHFN----------------AEKPFIFTSGWASPVYIDCRKLISYPRVRRALMEMAETTITRDIGFEQ------IDAVAGGETA-GIPFAAWIADRMMVPMQYVRKKPKGFGRNAQIEGHLEEGS---------RVLLVEDLTTDSRSKINFVNALRTAG--ATVNHCFVLFHYNIFKESVSVLK----DIDVDLHALATWWDVLRVAKASGYFETKTLDEVEKFLHAPAEWSAAHGG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -297781 for 1801 contacts (-165.3/contact) +
2D Compatibility (PS) -22090 + (NN) 1405 + (LL) 8828
1D Compatibility (HY) -1600 + (ID) 1500
Total energy: -312738.0 ( -173.65 by residue)
QMean score : 0.210
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