Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --------MASKDFAIGMILLSQIMVGFLGNFFLLYHYSFLCFTRGMLQSTDLILKHLTIANSLVILSKGIPQTMAAFGLKDS--LSDIGCKFVFYVHRVGRAVCVGNACLLSVFQVITISPSEFRWAELKLHAHKYIRSFILVLCWILNTLVNITVLLHVTGKWNSINSTKTNDYGYCSGGSRSRIPHSLHIVLLSSLDVLCLGLMTLASGSMVFILHRHKQQVQHIHGTNLSARSSPES-------RVTQSILVLVSTLCYFTRSPPSLHMSLFPNPSWWLLNTSALITA-CFPMVSPFVLMSRHPRIPRLGSACCGRNPQFPKLVR--------------------------- |
4XNV Chain:A ((38-382)) | SFKCALTKTGFQFYYLPAVYILVFIIGFLGNSVAIWMFVFH-----MKPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVN---LYGSILFLTCISAHRYSGVVYPKSLGRLKKKNAI--CISVLVWLI-VVVAISPILFYSG-----TGVRKNKTITCYDTTSDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLIVRALIYKMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIVCPLCGVGKDQFEEVEEPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDFQTPAMCAFNDRVYATYQVTRGLASLNSCVNPILYFLAGDTFRRR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150820 for 1989 contacts (-75.8/contact) +
2D Compatibility (PS) -29473 + (NN) -3739 + (LL) 912
1D Compatibility (HY) -22400 + (ID) 2400
Total energy: -207920.0 ( -104.53 by residue)
QMean score : 0.076
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