Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------LEMSCIQNLLPCKPYLP----GTEPPP---PVCCLPLKDMVAHQAQCLCSALAN--PDLLKDFNVT--------MDGALKLAKTCGASVDMSVCKNGNH-----------
1HSS Chain:A ((5-124))
MCYPGQAFQ---VPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39369 for 454 contacts (-86.7/contact) +
2D Compatibility (PS) -7590 + (NN) -788 + (LL) 616
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -51581.0 ( -113.61 by residue)
QMean score : 0.441
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: