Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIKLFFIFTLLFFDASTYCSCEDIIESIEICKEYTCQQ--YIGNEDFIEHKILGLSSKDLCVYIEK-----------QDNDEMVCHHSKYGMMMEKKYLESIFKVGNQEINDFIDIANLRAKECFFISNQKTSYTNRDYIIKEAVESNFDVLSQYNDIKSIFF--DKESVNKMVSEMKK-FNLRSSRAAKEEILDNFNSKVVSLDSILYLSPDTWKIWVNRKLFTNTKNLKVYSVTENYVTFVWTVNQKMTKKQPNDSKNVYFGYGNIMFTL-YPKQKFDLDSLSIK---- |
| 4U0O Chain:B ((8-288)) | ----------PSWLRISTVQRLVRQYGIHTICEEGRCPNRGECYGQKTATFLLLGPTCTRACAFCQVEKGHAPAAVDPEEPTKIAAAVATLGLRYVVLTSVARDDLPDQGAGQFVATMAAIRQRC---PGTEIEVLSPDFRMDRGRLSQRDCIAQIVAAQPACYNHNLETVRRLQGPVRRGATYESSLRVLATVKEL-NPDIPTKSGLMLGLGET-----EAEIIETLKDLRRVGCDRLTLGQYLPPSLSHLPVVKYWTPEEFNTLGNIARELGFSHVRSGPLVRSSYHAAE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U0O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9739 for 2075 contacts (4.7/contact) +
2D Compatibility (PS) -25240 + (NN) 3452 + (LL) 2740
1D Compatibility (HY) -2400 + (ID) 1500
Total energy: -13209.0 ( -6.37 by residue)
QMean score : 0.143
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