Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MVSRLHCFVGYFDELLILLYLKLKWYYVIKYCYCCKFSEIDLIVSKKKELIFIEVKASLLGEDILISYLQYQSIVNSSKYFLSEKLSFLDYPIR-YDLCFL----SLTKRACLYKKCLA---------------------------------------------------------------------------------- |
| 1Y88 Chain:A ((16-199)) | NLYFQGHMVARLLEEHGF----------ETKTNVIVQGN--CVEQEIDVVAERDGERYMIECK------------FHNIPVYTGLKEAMYTYARFLDVEKHGFTQPWIFTNTKFSEEAKKYAGCVGIKLTGWSYPEKEGIEVLLESKGLYPITILRIDKEVLDELVRAGLVFCRDVVSAGEEKLREIGLSAKKAREVIAEAKKVIGGS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y88.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64663 for 595 contacts (-108.7/contact) +
2D Compatibility (PS) -9388 + (NN) 723 + (LL) 2456
1D Compatibility (HY) -3600 + (ID) 1050
Total energy: -75522.0 ( -126.93 by residue)
QMean score : 0.178
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