Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MLAETWALLILTLLEI----ILSIDNLIFISLA--IDRVPNALRERVRIVGFALALQMRFVTLFFTSYILSMQKPIFYAASFNISVKDL-LMIAGGLFLIIKSF--------IELWNDIFSR--KQVEKKIDI-------KSQLLLAVLQIILIDLVFSVDSLLTAI-ALTHSMVIIAIAC-VFSILAMIFLSSYTAQLIKSSSSLKIIAIL-----FIVLVGVHLMLDGLHVELPKEYLYSSLTFALFVEVTSSIKKKVRCIKKKKQF-------------- |
| 1ZEL Chain:A ((2-297)) | AMVVSPAGADRRIPTWASRVVSGLARDRPVVVTKEDLTQRLTEAGCGRDPDSAIRELRRIGWLVQLPVKGTWAFIPPGEAAISDPYLPLRSWLARDQNAGFMLAGASAAWHLGYLDRQPDGRIPIWLPPAKRLPDGLASYVSVVRIPWNAADTALLAPRPALLVRRRLDLVAWATGLPALGPEALLVQIATRPASFGPWADLVPHLDDLVADCSDERLERLLSGRPTSAWQRASYLLDSGGEPARGQALLAKRHTEVMPVTRFTTAHSGESVWAPEYQLVDELVVPLLRVIGK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZEL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -262508 for 1757 contacts (-149.4/contact) +
2D Compatibility (PS) -24062 + (NN) 5289 + (LL) 0
1D Compatibility (HY) 0 + (ID) 1950
Total energy: -283231.0 ( -161.20 by residue)
QMean score : 0.254
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