Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHQTIRVNHAGEYGAICIYYGQKFILK---KSSIINKIIEMEGQEKKHFHYFNGKIKEQKVRPTVLLPVWYVLGVSLGVITAIMGKKAAMACTAAVEEVIGEHYREQVSYL---EDGELKEIISKFCNEELEHRDIAIEHNAESALGYNILSSFVKTGCKVAIYLSKLI
1TJO Chain:A ((32-170))
--DALNADLANVYVLYHQLKKHHWNVEGAEFRDLHLFLGEAAETAEEVADELAERVQALGGVPHASPETLQAEASVDVEDEDVYDIRTSLANDMAIYGDIIEATREHTELAENLGDHATAHMLREGLIELEDDAHHIEHYLEDDTLVTQGAL-----------------
General information:
TITO was launched using:
RESULT:
Template:
1TJO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37652 for 1021 contacts (-36.9/contact) +
2D Compatibility (PS) -13712 + (NN) -1418 + (LL) 1224
1D Compatibility (HY) 4800 + (ID) 600
Total energy: -47358.0 ( -46.38 by residue)
QMean score : 0.224
(partial model without unconserved sides chains):
PDB file :
Tito_1TJO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TJO-query.scw
PDB file :
Tito_Scwrl_1TJO.pdb
: