Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMAHIKEASDTNFSEMYGSLFPSKENGKGTWIDWKAAFKQQKLLEAESNVMLLEISYSLLKENQLYKEEVGTKLDNIIKNNQGNVRKGRQIC
3J6V Chain:U ((1-87))
MAKHLKFIARTVMVQ--EGNVEGAYRTLNRILTMDGLIEDIKRRRYYEKPCRRRQRESYETCRRIYNMEMARKINFLMRKNRADPWQGC---
General information:
TITO was launched using:
RESULT:
Template:
3J6V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9854 for 340 contacts (29.0/contact) +
2D Compatibility (PS) -9016 + (NN) -4751 + (LL) 680
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -5783.0 ( -17.01 by residue)
QMean score : 0.248
(partial model without unconserved sides chains):
PDB file :
Tito_3J6V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J6V-query.scw
PDB file :
Tito_Scwrl_3J6V.pdb
: