Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSKIYILLLFLIFLSSCANTRHSESDKNVLTVYSPYQSNLIRPILNEFEKQEHVKIEIKHGSTQVLLSNLHNEDFSERGDVFMGGVLSETIDHPED--FVPYQDTSVTQQLEDYRSNNKYVTSFLLMPTVIVVNSDLQGDI-KIRGYQDLLQP-ILKG---KIAYSNPNTTTTGYQHMRAI---YSMHHRVSDVHQFQ-NHAMQLSKTSKVIEDVAKGKYYAGLSYEQDARTWKNKGYPVSIVYPIE---GTMLNVDGIALVKNAHPHPKRKKLVQYLTSRSVQQRLVAEFDAKSIRKDVSEQSDQSIENLKNIPLIPKSKLPDIPHHKFLEMIQ |
| 3WAE Chain:A ((22-296)) | ----------------------------PTLTIYSGRGQSLVEPLVKQFEAETGIRVQVRYSTDAQILAALQEEGSRSPADLFWANTAGALGQASAKGLLRPLGETLLEK-PIAFVPASRTWVPVTVRLRVLAYNPDRIKAEELPESLLDLPRFAREKGLVGRVGW-TPTYSS-FQDMVAGMIALYGEEKTREWLLAMKALAPKAYPSNPAMLDAIRAGEVDLGSTNHYYVVRFRRAGYRLGMHHFRDGDAGNLALVTGAGLLKTSKNLAAATRFLTYLLSPQAQQYFVGNIGEYPLVKGVALDPN------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WAE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72921 for 2083 contacts (-35.0/contact) +
2D Compatibility (PS) -28293 + (NN) -5173 + (LL) 4600
1D Compatibility (HY) -10400 + (ID) 2050
Total energy: -114237.0 ( -54.84 by residue)
QMean score : 0.373
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