Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEYEYPIDLDWSNEEMISVINFFNHVEKYYESGVTAGDFMGAYKRFKEIVPAKAEEKQIFNTFEKSSGYNSYKAVQDVKTHSEEQRVTAKK--
1GXG Chain:A ((1-85))
MELKNSIS-DYTETEFKKIIEDIINCEG----D--EKKQDDNLEHFISVTEHPSGSDLIYYPEGNNDG-SPEAVIKEIKEWRAANGKSGFKQG
General information:
TITO was launched using:
RESULT:
Template:
1GXG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3516 for 605 contacts (-5.8/contact) +
2D Compatibility (PS) -8358 + (NN) 226 + (LL) 772
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -14276.0 ( -23.60 by residue)
QMean score : 0.256
(partial model without unconserved sides chains):
PDB file :
Tito_1GXG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1GXG-query.scw
PDB file :
Tito_Scwrl_1GXG.pdb
: