Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKFKVVRAFKDIEHNQHKYKVGELYPAEGYNNPRVELLTNQIKNKYDKVYIVPLDKLTKQELLELCESLQKKASSSMVKSEIVDLLNGEDNDD
1Y02 Chain:A ((77-114))
-------------------------------------------------------MKMKVKDLRDYLSLHDISTEMCREKEELVLLVLGQQPV-
General information:
TITO was launched using:
RESULT:
Template:
1Y02.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4056 for 195 contacts (-20.8/contact) +
2D Compatibility (PS) -4043 + (NN) -2881 + (LL) 3996
1D Compatibility (HY) -1600 + (ID) 350
Total energy: -8934.0 ( -45.82 by residue)
QMean score : 0.746
(partial model without unconserved sides chains):
PDB file :
Tito_1Y02.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y02-query.scw
PDB file :
Tito_Scwrl_1Y02.pdb
: