Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIVEVEHQRQGVDLIKIDNDE-TKIIFTNYGARVVSWKYHDNNIVLGNVVEADEFYHSNPFKFGASIGRYSGRIDNAKFKLKGKEYQLEKNNGEHHLHGGCHGLDNKLFDYEIRNEIAQIKVIFKTVLKSADDHFPGDIDVTITHIYDADHQWSIEYEAVASEDTLFSPMNHVYFNLNRD-NNVVDNH--RISSNQLDMYVLDERNIVTGDILDLHEV---FEDNKIKLSDIFTSQHAQLSQQMTRFGGLDHPFTVGEHKMYVENHEFMLE-----VDTDMPHVVFFTFNQPDEWDSPFNIYKP--HSGFTLETQFLPNDINLYGEKAPSI----LKAGEVFNSKTSFRIEEKVEND |
| 1NS8 Chain:B ((2-341)) | -SIKIRDFGLGSDLISLTNKAGVTISFTNLGARIVDWQKDGKHLILG-FDSAKEYLEKDAYP-GATVGPTAGRIKDGLVKISGKDYILNQNEGPQTLHGGEESIHTKLWTYEVTDLGAEVQVKFSLVSNDGTNGYPGKIEMSVTHSFDDDNKWKIHYEAISDKDTVFNPTGHVYFNLNGDASESVENHGLRLAASRF-VPLKDQTEIVRGDIVDIKNTDLDFRQEK-QLSNAFNSNMEQV--QLVK--GINHPFLLDQLGLDKEQARLTLDDTSISVFTDQPSIVIFTANFGD-LGTLYHEKKQVHHGGITFECQVSPGS-----EQIPELGDISLKAGEKYQATTIYSLHTKLE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NS8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102704 for 2711 contacts (-37.9/contact) +
2D Compatibility (PS) -35030 + (NN) -9138 + (LL) 608
1D Compatibility (HY) -24000 + (ID) 5900
Total energy: -176164.0 ( -64.98 by residue)
QMean score : 0.470
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